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| Product Type | 4U JBOD Storage Chassis |
| Model | SC946LE1C-R1K66JBOD |
| Form Factor | 4U Rackmount |
| Dimensions (H x W x D) | 6.9 x 17.2 x 26.5 in (175 x 437 x 673 mm) |
| Weight | Approximately 50 lb (22.7 kg) |
| Drive Bays | 45 x 3.5" hot-swap SAS3/SATA3 (top-loading) |
| Optional Drive Bays | 2 x 2.5" rear accessible |
| Power Supply | 2 x 1000W/1600W redundant (Platinum Level), PWS-1K66P-1R |
| Cooling | 5 x 80mm hot-swap high-speed fans |
| Expansion | 1 SAS expander (SFF-8644 mini-SAS HD ports) |
| Management | IPMI 2.0 with dedicated LAN port |
| Front Panel | Power button, UID/IPMI button, status LEDs, optional LCD screen |
| Backplane | BPN-SAS3-946LEL1 (SAS3 expander) |
| Control Board | CSE-PTJBOD-CB3 JBOD control board |
| Rack Rail Compatibility | Depth 26.5 to 36.4 in (673 to 925 mm); square, round, threaded holes |
| Cable Management | Supports cable management arm (CMA) |
| Cooling Features | Fan speed control via IPMI; failover ramps to full speed |
| LED Indicators | Power, NIC, Power Fail, Information (overheat/fan/power), drive activity/status |
| Security | Locking front bezel (optional), cover screws |
| Maintenance | Hot-swappable drives, fans, PSUs; top cover access for drives |
| Operating Temperature | 10°C to 35°C (50°F to 95°F) ambient |
| Spare Parts | Available through Supermicro authorized distributors |
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USER MANUAL SuperChassis SC946L Supermicro
natural_image
Front view of a server rack unit with hexagonal grid and control panel (no visible text or symbols)SC946LE1C-R1K66JBOD
USER'S MANUAL
Revision 1.0
The information in this User's Manual has been carefully reviewed and is believed to be accurate. The vendor assumes no responsibility for any inaccuracies that may be contained in this document, and makes no commitment to update or to keep current the information in this manual, or to notify any person or organization of the updates. Please Note: For the most up-to-date version of this manual, please see our website at www.supermicro.com.
Super Micro Computer, Inc. ("Supermicro") reserves the right to make changes to the product described in this manual at any time and without notice. This product, including software and documentation, is the property of Supermicro and/or its licensors, and is supplied only under a license. Any use or reproduction of this product is not allowed, except as expressly permitted by the terms of said license.
IN NO EVENT WILL Super Micro Computer, Inc. BE LIABLE FOR DIRECT, INDIRECT, SPECIAL, INCIDENTAL, SPECULATIVE OR CONSEQUENTIAL DAMAGES ARISING FROM THE USE OR INABILITY TO USE THIS PRODUCT OR DOCUMENTATION, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGES. IN PARTICULAR, SUPER MICRO COMPUTER, INC. SHALL NOT HAVE LIABILITY FOR ANY HARDWARE, SOFTWARE, OR DATA STORED OR USED WITH THE PRODUCT, INCLUDING THE COSTS OF REPAIRING, REPLACING, INTEGRATING, INSTALLING OR RECOVERING SUCH HARDWARE, SOFTWARE, OR DATA.
Any disputes arising between manufacturer and customer shall be governed by the laws of Santa Clara County in the State of California, USA. The State of California, County of Santa Clara shall be the exclusive venue for the resolution of any such disputes. Supermicro's total liability for all claims will not exceed the price paid for the hardware product.
FCC Statement: This equipment has been tested and found to comply with the limits for a Class B digital device pursuant to Part 15 of the FCC Rules. These limits are designed to provide reasonable protection against harmful interference when the equipment is operated in a commercial environment. This equipment generates, uses, and can radiate radio frequency energy and, if not installed and used in accordance with the manufacturer's instruction manual, may cause harmful interference with radio communications. Operation of this equipment in a residential area is likely to cause harmful interference, in which case you will be required to correct the interference at your own expense.
California Best Management Practices Regulations for Perchlorate Materials: This Perchlorate warning applies only to products containing CR (Manganese Dioxide) Lithium coin cells. "Perchlorate Material-special handling may apply. See www.dtsc.ca.gov/hazardouswaste/perchlorate".

WARNING: This product can expose you to chemicals including lead, known to the State of California to cause cancer and birth defects or other reproductive harm. For more information, go to www.P65Warnings.ca.gov.
The products sold by Supermicro are not intended for and will not be used in life support systems, medical equipment, nuclear facilities or systems, aircraft, aircraft devices, aircraft/emergency communication devices or other critical systems whose failure to perform be reasonably expected to result in significant injury or loss of life or catastrophic property damage. Accordingly, Supermicro disclaims any and all liability, and should buyer use or sell such products for use in such ultra-hazardous applications, it does so entirely at its own risk. Furthermore, buyer agrees to fully indemnify, defend and hold Supermicro harmless for and against any and all claims, demands, actions, litigation, and proceedings of any kind arising out of or related to such ultra-hazardous use or sale.
Manual Revision 1.0
Release Date: April 16, 2018
Unless you request and receive written permission from Super Micro Computer, Inc., you may not copy any part of this document. Information in this document is subject to change without notice. Other products and companies referred to herein are trademarks or registered trademarks of their respective companies or mark holders.
Copyright © 2018 by Super Micro Computer, Inc.
All rights reserved.
Printed in the United States of America
Preface
About this Manual
This manual is written for professional system integrators and PC technicians. It provides information for the installation and use of the chassis. Installation and maintenance should be performed by experienced technicians only.
This document lists compatible parts available when this document was published. Refer to the Supermicro web site for updates on supported parts and configurations.
This manual may be periodically updated without notice. Please check the Supermicro Web site for possible updates.(http://www.supermicro.com).
Notes
For your system to work properly, please follow the links below to download all necessary drivers, utilities and the user's manual for your server.
• Supermicro product manuals: http://www.supermicro.com/support/manuals/
• Product drivers and utilities: ftp://ftp.supermicro.com
- Product safety info: http://www.supermicro.com/about/policies/safety_information.cfm
If you have any questions, please contact our support team at: support@supermicro.com.
Warnings
Special attention should be given to the following symbols used in this manual.

Warning! Indicates important information given to prevent equipment/property damage or personal injury.

Warning! Indicates high voltage may be encountered when performing a procedure.
Contents
Chapter 1 Introduction
1.1 Models....8
1.2 Unpacking the System 8
1.3 Chassis Features 9
Control Panel 9
Chassis Front....10
Chassis Rear....11
Chassis Top....12
1.4 System Status LCD Screen 13
Introduction....13
Main Screen....14
System Status Submenu....14
Hard Disk Drive Status....15
Power Supply Status....15
Cable Connection Status....15
Fans Status....15
Thermal Monitor....15
IPMI Submenu ....15
System Info....16
IPMI Event Log....16
Settings Submenu....17
Error Message....17
UID Message 17
1.5 Where to get Replacement Components....18
1.6 Returning Merchandise for Service....18
Chapter 2 Installation in a Rack
2.1 Preparing for Setup....19
Choosing a Setup Location....19
Rack Precautions....19
Server Precautions....20
Rack Mounting Considerations ....20
Ambient Operating Temperature....20
Airflow....20
Mechanical Loading....20
Circuit Overloading....21
Reliable Ground....21
2.2 Installing the Rails....22
Identifying the Rails 22
Releasing the Inner Rail 23
Installing the Inner Rails 24
Installing the Outer Rails onto the Rack 25
Adapters for Round and Threaded Hole Racks 26
2.3 Installing the Chassis into a Rack....27
Removing the Chassis from the Rack....28
2.4 Optional Quick Installation Method 28
2.4 Installing the Cable Management Arm ....29
Chapter 3 Maintenance and Component Installation
3.1 Power Up/Power Down Sequences....34
Power Up 34
First Use or Power Cord Plug-In....34
After Normal Shutdown by IPMI or Power Button....34
After a Power Loss....34
Power Down....34
Removing Power from the System....35
3.2 Cable Connections....35
IPMI 35
SAS Cables....36
Cascading Storage....37
3.3 Accessing the Chassis....38
3.4 Chassis Components ....39
Hard Drives ....39
Hard Drive Carrier Indicators....39
Hard Drive Installation 40
System Cooling 42
Checking the Server Air Flow....44
Overheating 44
Power Supply 45
Power Supply LEDs....45
Removing the JBOD Control Board....46
Appendix A Power Supply Specifications
Appendix B Standardized Warning Statements for AC Systems
Appendix C Backplane Specifications
Cascading Configuration, Backplane to Internal HBA Controllers....82
Cascading Configuration, Backplane to Internal SAS Controllers....83
Appendix D CSE-PTJBOD-CB3 Control Board
Contacting Supermicro
Headquarters
Address: Super Micro Computer, Inc.
980 Rock Ave.
San Jose, CA 95131 U.S.A.
Tel: +1 (408) 503-8000
Fax: +1 (408) 503-8008
Email: marketing@supermicro.com (General Information)
support@supermicro.com (Technical Support)
Website: www.supermicro.com
Europe
Address: Super Micro Computer B.V.
's-Hertogenbosch, The Netherlands
Tel: +31 (0) 73-6400390
Fax: +31 (0) 73-6416525
Email: sales@supermicro.nl (General Information)
support@supermicro.nl (Technical Support)
rma@supermicro.nl (Customer Support)
Website: www.supermicro.nl
Asia-Pacific
Address: Super Micro Computer, Inc.
3F, No. 150, Jian 1st Rd.
Zhonghe Dist., New Taipei City 235
Taiwan (R.O.C)
Tel: +886-(2) 8226-3990
Fax: +886-(2) 8226-3992
Email: support@supermicro.com.tw
Website: www.supermicro.com.tw
Chapter 1
Introduction
Optimized for enterprise-level high capacity storage applications, Supermicro's SC946L JBOD chassis features up to 45 hot-swap 3.5" SAS3 hard drives in top-loading drive bays. It is ideal for cloud backup, data replication or high density archive storage applications
This design offers extra high-density of HDDs per space ratio in a 4U form factor. The chassis features high power efficiency, optimized HDD signal trace routing and improved HDD carrier design to dampen HDD vibrations and maximize performance. Equipped with two redundant high-efficiency power supplies and five 80 mm high-speed, low-vibration, hot-swappable cooling fans, the SC946L JBOD is a reliable maintenance storage server.
1.1 Models
| SC946L JBOD Chassis Models | |||
| Model Drives SAS Expanders Power Supply | |||
| SC946LE1C-R1K66JBOD 45 SAS/SATA 1 | 1000W/1600W redundant (Platinum Level) | ||
1.2 Unpacking the System
Inspect the box in which the chassis was shipped. If any equipment appears damaged, file a claim with the carrier who delivered it.
1.3 Chassis Features
Control Panel
Power switches and status LEDs are located on the control panel on the front of the chassis.

Figure 1-1. Control Panel
| Control Panel Features | ||
| Item Features Description | ||
| 1 Power button | The main power switch applies or removes primary power from the power supply to the server but maintains standby power. To perform most maintenance tasks, unplug the system to remove all power. | |
| 2 UID/IPMI button | The uinit identification (UID) button turns on or off the blue light function of the Information LED and a blue LED on the rear of the chassis. These are used to locate the server in large racks and server banks.The same button functions as an IPMI reset button. Hold the button for ten seconds to reset IPMI to factory derfaults. | |
| 3 Power LED | Indicates power is being supplied to the system power supply units. This LED is illuminated when the system is operating normally. | |
| 4 NIC LED Indicates network activity on the LAN when flashing. | ||
| 5 Power Fail LED Indicates a power supply module has failed. | ||
| 6 Information LED Alerts operator to several states, as noted in the following table. | ||
| Information LED | |
| Status Description | |
| Continuously on and red | An overheat condition has occurred. (This may be caused by cable congestion.) |
| Blinking red (1Hz) Fan failure, check for an inoperative fan. | |
| Blinking red (0.25Hz) | Power failure, check for a non-operational power supply. |
| Solid blue | Local UID has been activated. Use this function to locate the server in a rack mount environment. |
| Blinking blue | Remote UID is on. Use this function to identify the server from a remote location. |
Chassis Front
The illustration below shows the features included on the front of the chassis.

Figure 1-2. Front View (optional LCD Status screen pictured)
| Front Chassis Features | ||
| Item Feature Description | ||
| 1 Control Panel Power, UID, network, overheat | ||
| 2 LCD Status Screen | (Optional purchase item) LCD panel for system status and error information;see Section 1.4 for details | |
Chassis Rear
The illustration below shows the features included on the rear of the chassis. Power supply modules display status lights.

Figure 1-3. Rear View
| Rear Chassis Features | ||
| Item Feature Description | ||
| 1 Power Supply modules Two, redundant hot-swap | ||
| 2 Fans Five, hot-swap | ||
| 3 Mini-SAS Ports | Mini-SAS HD ports for internal or external cascading expander combinationsOne for SC946LE1C-R1K66JBOD. | |
| 4 IPMI Port Networking port used for remote management | ||
Chassis Top
A hinged cover on the top of the chassis opens to access the drive bays. Individual hard drive carriers display status lights.

natural_image
Technical line drawing of an open industrial rack unit with internal compartments and mounting holes (no text or symbols)45 Drives Mounted Vertically
Figure 1-4. Top View
1.4 System Status LCD Screen
The SC946L JBOD offers an (optional) LCD display on the front of the chassis that shows the status of many system components. The functions are described in this section.
Introduction
This feature gives the user the ability to monitor drives, power supplies, fans, and connections. It shows temperature, events, and errors. The LCD display is activated as the system powers on.

Figure 4-1. LCD Status LCD Screen on the Chassis Front
The user can navigate the menus using the four control buttons: scroll up, scroll down, Cancel, and Enter. Note: The SKU shown in the screen is for reference only and may different with the SKU user is currently using.
Main Screen
After a welcome page, the Main screen appears. Note that the screen may reflect a model or part number similar to what you have, but may reflect a slightly different SKU.

Figure 4-1. System Status Main Page
Throughout the GUI, component status is displayed in color where green indicates normal operation, red indicates a problem, and gray indicates the component is not installed. The UID Alert is blue when active; the Error Alert is red when active.
System Status Submenu
Main Page > System Status

Figure 4-2. System Status Submenu
For JBOD storage enclosures, the Processor and Memory items are not available.
Hard Disk Drive Status
Main Page > System Status > Hard Disk Drive
This page displays all drive bays. The drive may be operational, failed (if on the server node side a hardware RAID card is installed and connected), or not installed.
Power Supply Status
Main Page > System Status > Power Supply
This page shows the status and temperature of each power supply unit.
Cable Connection Status
Main Page > System Status > Cable Connection
The Cable Connection page shows the status of connections to the backplanes.
Fans Status
Main Page > System Status > Fan
The Fan page shows whether each fan is operational, failed or not installed.
Thermal Monitor
Main Page > Thermal Monitor
The Thermal Monitor shows the temperature of the backplane, JBOD control board (CB3), and ambient chassis temperature.
IPMI Submenu
Main Page > IPMI


System Info

Event Log

Figure 4-10. IPMI Submenu
System Info
Main Page > IPMI > System Info
The IPMI System Info pages show:
• IPMI firmware version
• BIOS firmware version
- BMC IP Address
- MAC Address
• JBOD Control board serial number
• Product serial number
• Chassis serial number
• Power supplies 1 and 2 serial numbers
IPMI Event Log
Event Log page will show the latest 100 critical errors:
- /*CPU OverHeating*/
- /*MEM OverHeating*/
-
/*PSU FAIL*/
-
/*MEM ECC Error*/
- /*MEM MRC Error*/
- /*Fan Error*/
- HDD activity
Settings Submenu
Main Page > Settings > Brightness
This item allows the user to adjust the LCD brightness.
Error Message
An error message pops up when a critical error occurs and shows the latest three critical errors. The user can choose to navigate to event log or ignore message.
Also, there will be an error icon on the bottom right of the page to remind user that there are critical errors that require attention.

Figure 4-15. Error Message
UID Message
A message pops up when the user activates UID. The UID icon (blue circle with a white exclamation mark) in the bottom right corner remains active until the user turns off UID.
1.5 Where to get Replacement Components
If you need replacement parts for your system, to ensure the highest level of professional service and technical support, purchase exclusively from our Supermicro Authorized Distributors/System Integrators/Resellers. A list can be found at: http://www.supermicro.com. Click the "Where to Buy" link.
1.6 Returning Merchandise for Service
A receipt or copy of your invoice marked with the date of purchase is required before any warranty service will be rendered. You can obtain service by calling your vendor for a Returned Merchandise Authorization (RMA) number. When returning to the manufacturer, the RMA number should be prominently displayed on the outside of the shipping carton, and mailed prepaid or hand-carried. Shipping and handling charges will be applied for all orders that must be mailed when service is complete.
For faster service, RMA authorizations may be requested online (http://www.supermicro.com/support/rma/).
Whenever possible, repack the chassis in the original Supermicro carton, using the original packaging material. If these are no longer available, be sure to pack the chassis securely, using packaging material to surround the chassis so that it does not shift within the carton and become damaged during shipping.
This warranty only covers normal consumer use and does not cover damages incurred in shipping or from failure due to the alteration, misuse, abuse or improper maintenance of products.
During the warranty period, contact your distributor first for any product problems.
Chapter 2
Installation in a Rack
This chapter provides advice and instructions for mounting your system in a rack.
2.1 Preparing for Setup
The box in which the system was shipped should include the hardware needed to install it into the rack. Please read this section in its entirety before you begin the installation.
Choosing a Setup Location
- The system should be situated in a clean, dust-free area that is well ventilated. Avoid areas where heat, electrical noise and electromagnetic fields are generated.
- Leave enough clearance in front of the rack so that you can open the front door completely (\~25 inches) and approximately 30 inches of clearance in the back of the rack to allow sufficient space for airflow and access when servicing.
- This product should be installed only in a Restricted Access Location (dedicated equipment rooms, service closets, etc.).
- This product is not suitable for use with visual display workplace devices according to §2 of the German Ordinance for Work with Visual Display Units.
Rack Precautions
- Ensure that the leveling jacks on the bottom of the rack are extended to the floor so that the full weight of the rack rests on them.
- In single rack installations, stabilizers should be attached to the rack. In multiple rack installations, the racks should be coupled together.
- Always make sure the rack is stable before extending a server or other component from the rack.
-
Extend only one server or component at a time - extending two or more simultaneously may cause the rack to become unstable.
-
When initially installing the server to a rack, test that the rail locking tabs engage to prevent the server from being overextended. Have a rack lift in place as a precaution in case the test fails.
- In any instance of pulling the system from the rack, always use a rack lift and follow all associated safety precautions.
Server Precautions
- Review the electrical and general safety precautions in Chapter.
- Determine the placement of each component in the rack before you install the rails.
- Install the heaviest server components at the bottom of the rack first and then work your way up.
- Use a regulating uninterruptible power supply (UPS) to protect the server from power surges and voltage spikes and to keep your system operating in case of a power failure.
- Allow any drives and power supply modules to cool before touching them.
- When not servicing, always keep the front door of the rack and all covers/panels on the servers closed to maintain proper cooling.
Rack Mounting Considerations
Ambient Operating Temperature
If installed in a closed or multi-unit rack assembly, the ambient operating temperature of the rack environment may be greater than the room's ambient temperature. Therefore, consideration should be given to installing the equipment in an environment compatible with the manufacturer's maximum rated ambient temperature (Tmra).
Airflow
Equipment should be mounted into a rack so that the amount of airflow required for safe operation is not compromised.
Mechanical Loading
Equipment should be mounted into a rack so that a hazardous condition does not arise due to uneven mechanical loading.
Circuit Overloading
Consideration should be given to the connection of the equipment to the power supply circuitry and the effect that any possible overloading of circuits might have on overcurrent protection and power supply wiring. Appropriate consideration of equipment nameplate ratings should be used when addressing this concern.
Reliable Ground
A reliable ground must be maintained at all times. To ensure this, the rack itself should be grounded. Particular attention should be given to power supply connections other than the direct connections to the branch circuit (i.e. the use of power strips, etc.).

To prevent bodily injury when mounting or servicing this unit in a rack, you must take special precautions to ensure that the system remains stable. The following guidelines are provided to ensure your safety:
- This unit should be mounted at the bottom of the rack if it is the only unit in the rack.
- When mounting this unit in a partially filled rack, load the rack from the bottom to the top with the heaviest component at the bottom of the rack.
- If the rack is provided with stabilizing devices, install the stabilizers before mounting or servicing the unit in the rack.
- Slide rail mounted equipment is not to be used as a shelf or a work space.
2.2 Installing the Rails
There are a variety of rack units on the market, which may require a slightly different assembly procedure. Do not use a two post "telco" type rack. This rail set fits a rack between 26.5" and 36.4" deep.
The following is a basic guideline for installing the system into a rack with the rack mounting hardware provided. You should also refer to the installation instructions that came with the specific rack you are using.
Identifying the Rails
The chassis package includes two rail assemblies. Each assembly consists of three sections: An inner rail that secures directly to the chassis, an outer rail that secures to the rack, and a middle rail which extends from the outer rail. These assemblies are specifically designed for the left and right side of the chassis and labeled.

Figure 2-1. Identifying the Outer Rail, Middle Rail and Inner Rail (Left Rail Assembly Shown)
Releasing the Inner Rail
Each inner rail has a locking latch. This latch prevents the server from coming completely out of the rack when when the chassis is pulled out for servicing.
To mount the rail onto the chassis, first release the inner rail from the outer rails.
- Pull the inner rail out of the outer rail until it is fully extended as illustrated below.
- Press the locking tab down to release the inner rail.
- Pull the inner rail all the way out.

Figure 2-2. Extending and Releasing the Inner Rail
Installing the Inner Rails
Begin the rack mounting procedure by installing the inner rails to the chassis.
- Identify the left and right inner rails. They are labeled.
- Place the inner rail firmly against the side of the chassis, aligning the angled posts on the side of the chassis with the holes in the inner rail.
- Slide the inner rail forward toward the front of the chassis and under the angled posts until the rail lock snaps into place, securing the rail to the chassis.
- If desired, secure the rail with a locking screw.

Figure 2-3. Installing the Rails

Warning: Do not pick up the server with the front handles. They are designed to pull the system from a rack only.
Installing the Outer Rails onto the Rack
- Press upward on the locking tab at the rear end of the middle rail.
- Push the middle rail back into the outer rail.
- Hang the hooks on the front of the outer rail onto the square holes on the front of the rack. If desired, use screws to secure the outer rails to the rack.
- Pull out the rear of the outer rail, adjusting the length until it just fits within the posts of the rack.
- Hang the hooks of the rear section of the outer rail onto the square holes on the rear of the rack. Take care that the proper holes are used so the rails are level. If desired, use screws to secure the rear of the outer rail to the rear of the rack.
- Repeat for the other outer rail.

Figure 2-4. Extending and Mounting the Outer Rails
Adapters for Round and Threaded Hole Racks
The chassis includes adapter brackets for those customers using round hole racks or racks with threaded holes size M5 or larger.
Installing the Outer Rails with Adapter Brackets
- Place the hooks of the front of the outer rail into the square holes of one of the adapter brackets.
- Place the hooks of the rear of the outer rail into the square holes of a second adapter bracket.
- Adjust the length of the outer rail to fit within the rack uprights.
- Secure the front adapter bracket to the front of the rack using the screws recommended by the rack manufacturer.
- Secure the rear adapter bracket to the rear of the rack in the same manner.
2.3 Installing the Chassis into a Rack
After the rails are installed on the chassis and on the rack, the server can be installed in the rack. It is heavy and requires two to three people or a lift.
Installing the Chassis into a Rack
- Pull both middle rails out the front of the outer rail until each clicks to a stop.
- Align the inner rails on the chassis with the front of the middle rails.
- Slide the inner rails on the chassis into the middle rails, keeping the pressure even on both sides. When partially in, the locking levers will stop further progress.
- Press down the locking levers on the inside of the inner rails and push the chassis all the way into the rear of the rack. The front latches will click into place.

Note: Figures are for illustrative purposes only. Your actual chassis may differ. Always install servers into racks from the bottom up.
Figure 2-5. Installing the Chassis into the Rack

Warning: When initially installing the server to a rack, test that the rail locking tabs engage to prevent the server from being overextended. Have a rack lift in place as a precaution in case the test fails.
Removing the Chassis from the Rack

Caution! It is dangerous for a single person to off-load the heavy chassis from the rack without assistance. Be sure to have sufficient assistance supporting the chassis when removing it from the rack. Use a lift.
- Lift the release levers and pull the chassis out the front of the rack until it stops.
- Press the release latches on each of the inner rails downward simultaneously and continue to pull the chassis completely out of the rack.

Figure 2-6. Removing the Chassis From the Rack

Stability hazard. The rack stabilizing mechanism must be in place, or the rack must be bolted to the floor before you slide the unit out for servicing. Failure to stabilize the rack can cause the rack to tip over.
Slide rail mounted equipment is not to be used as a shelf or a work space.
2.4 Optional Quick Installation Method
The following quick installation method may be used to install the chassis to a rack.
Installing the Chassis into a Rack
- Install the whole rail assembly into the rack in a manner similar to that described in the previous section, "Installing the Outer Rails onto the Rack."
- Fully extend the inner rails.
- Using a lift, carefully align the chassis between the inner rails.
- Install the inner rails on the chassis in a manner similar to that described in the previous section, "Installing the Inner Rails."
2.4 Installing the Cable Management Arm
The SC946L JBOD chassis supports a cable management arm (CMA) that keeps the rear cables organized and clear of the rail mechanisms when the system is extended out the front of the rack for maintenance. The kit includes six fabric Velcro cable ties.
The CMA attaches to the rack mounting rails by means of four connectors. They are labeled on the connectors 1, 2, 3, and 4.

Figure 2-7. Cable Management Arm and Velcro Straps
Installing the Cable Management Arm
- Slide CMA connector #1 forward onto the two posts on the rear of the right inner rail (right side when viewed from the front). It snaps into place.
- Slide CMA connector #2 forward onto the two posts on the rear of the right middle rail. It snaps into place.

Figure 2-8. Installing the Connectors 1 and 2
-
Slide CMA connector #3 forward onto the two posts on the rear of the left middle rail. It snaps into place.
-
For CMA connector #4, align the metal tabs with the slots on the rear of the left outer rail and push it forward. It snaps into place.

Figure 2-9. Intalling the Connectors 3 and 4

Figure 2-10. Routing the Cables
- Open the four red plastic caps and route the cables into the wire carrier.
- If necessary, adjust the U-brackets to clear chassis components.

Figure 2-11. Adjusting the U-Brackets
- Use the six Velcro straps to secure the cables to the CMA. Use a strap on either side of each joint and one on each U-bracket, inserting it through the slot on the bracket.
- Slide the chassis forward and backward in the rack to confirm that the cable management arm is operating smoothly. If necessary, loosen the straps for smoother movement.
If at some time you must remove the cable management arm, follow this procedure.
Removing the Cable Management Arm
- Remove cables from the CMA, releasing the Velcro straps and the red plastic caps.
- For CMA connector #4, pull the metal release tab toward the center of the rack and slide the connector toward the rear to release it.
- For CMA connectors #3, #2, and #1, depress the front edge of the yellow plastic rocker lock, and slide the connector toward the rear to release it.
Chapter 3
Maintenance and Component Installation
This chapter provides instructions on installing and replacing main system components. To assure compatibility, only use components that match the specifications or part numbers given. Installation or replacement of most components require that power first be removed from the system.
3.1 Power Up/Power Down Sequences
There are several procedures to turn on or off the system with the CB3 JBOD control board.
Power Up
First Use or Power Cord Plug-In
- Plug the power cords into the rear of the power supplies.
- Wait until blue Information LED starts to blink.
- Press the power button once. The JBOD control board initiates the power up sequence in three seconds.
After Normal Shutdown by IPMI or Power Button
Press the power button once. The JBOD control board will initiate the power up sequence in three seconds.
After a Power Loss
The system will power up automatically approximately fifteen seconds after the power returns.
Power Down
- Hold down the power button. The blue Information LED will begin blinking. Continue to hold the power button.
- Release power button after blue LED stops blinking and goes dark.
- The shutdown sequence will begin and shut down the system within ten seconds
Removing Power from the System
Before performing most setup or maintenance tasks, use the following procedure to ensure that power has been removed from the system.
-
After the system has completely shut-down, carefully grasp the head of the power cord and gently pull it out of the back of the power supply. If your system has dual power supplies, remove the cords from both power supplies.
-
Disconnect the cord from the power strip or wall outlet.
3.2 Cable Connections
IPMI
The SC946L JBOD chassis offers intelligent management with IPMI to provide hardware health monitoring and remote power control. To enable, connect to the storage enclosure using the dedicated IPMI LAN connector (Figure 1-3).
The default IP address configuration mode is DHCP (Dynamic Host and Configuration Protocol). When connected to the network, you can find the IP address assigned to this system from DHCP server. You can now connect using the User name and Password as shown below.
Note: The IP configuration mode can be toggled between DHCP and Static IP. Press and hold the reset button on the front panel for 6-8 seconds to change to static IP mode with the default IP address as shown below. Press and hold the reset button for 10-12 seconds to change the IP configuration mode back to DHCP.
Simple setup configuration:
IPMI default IP: 192.168.1.99
User name: ADMIN
Password: ADMIN
For details on configuring and using IPMI, refer to the Supermicro IPMI manual.
SAS Cables
This drawing shows connectors for SAS cabling. For primary and secondary, the top two connectors are marked In, and the bottom two connectors are marked In/Out.
Connect two mini-SAS HD cables (SFF-8644) from the head server node host bus adapter (HBA) card to the top two Primary receptacles marked In. If using the E2C model for redundancy, connect two more mini-SAS HD cables to the top two Secondary receptables also marked In. Cables are described in Appendix B.
To cascade out, connect cables from the two receptacles marked In/Out to the next JBOD storage enclosure. (see Figure 3-2 and 3-3)

Figure 3-1. SAS and IPMI Cables
Cascading Storage
The following diagram shows a server with a single host bus adapter (HBA). The SC946L JBOD storage enclosure model E1C can accommodate this configuration.

Figure 3-2. Sample Cascading Storage, Single HBA
3.3 Accessing the Chassis
Drive bays can be accessed by opening the top cover. Other components can be accessed though the front or rear of the chassis.
Caution: Except for short periods of time, do not operate the server without the cover in place. It helps provide proper airflow and prevent overheating.
Opening the Drive Cover
On the right side of the chassis, release the two thumb screws and lift the cover. The cover holds an open position at 100 degrees without additional support. Do not open farther.

Figure 3-4. Opening the Drive Cover
3.4 Chassis Components
Hard Drives
The SC946L JBOD chassis supports forty five 3.5" hard drives. They can be removed without powering down the system if your operating system supports RAID. In addition, it supports two 2.5" drives accessible at the rear of the chassis.
Hard Drive Carrier Indicators
Each hard drive carrier has two LED indicators: an activity indicator and a status indicator. The status indicator functions in RAID configurations. For non-RAID configurations, it remains off. See the table below for details.
| Hard Drive Carrier LED Indicators | |||
| Color Blinking Pattern Behavior for Device | |||
| Activity LED | Blue Solid On SAS drive installed | ||
| Blue Blinking I/O activity | |||
| Status LED | Red Solid On Failure of drive with RSTe support | ||
| Red Blinking at 1 Hz Rebuild drive with RSTe support | |||
| Red Blinking with two blinks and one stop at 1 Hz | Hot spare for drive with RSTe support | ||
| Red On for five seconds, then off | Power on for drive with RSTe support | ||
| Red Blinking at 4 Hz Identify drive with RSTe support | |||
Note: Enterprise level hard disk drives are recommended for use in Supermicro chassis and servers. For information on recommended HDDs, visit the Supermicro website and check the "Drive Options" in the product webpage.
Hard Drive Installation
The drives are mounted in drive carriers to simplify their installation and removal from the chassis. These carriers also help promote proper airflow through the drive bays.
Removing Hard Drive Carriers from the Chassis
- Open the top front cover of the chassis.
- Slide the release button on the drive carrier, which opens the carrier handle.
- Use the drive carrier handle to pull the drive out of the chassis.

Figure 3-5. Removing a Hard Drive Carrier
Caution: Except for short periods of time, such as swapping hard drives, do not operate the server with the hard drive bays empty.
Installing a 3.5" Hard Disk Drive
With the drive carrier removed from the storage compartment:
- Under the main the carrier handle, find and the lift the breakout lever and pull out the side of the carrier.

Figure 3-6. Opening the Drive Carrier
-
Remove the dummy drive from the carrier.
-
Insert the hard drive into the drive carrier. Orient the drive by matching the two alignment pins on the side and by noting the notch in the carrier for the HDD connectors. Close the side of the carrier until it snaps in place.
-
Slide the carrier assembly into its spot in the chassis until it clicks into locked position.
System Cooling
Five hot-swap, heavy-duty rear mounted fans provide cooling. They can be replaced without powering down the system.
Fan speed is controlled by a system temperature setting in IPMI. If a fan fails, the remaining fans will ramp up to full speed. Replace any failed fan at your earliest convenience with the same type and model. The system can continue to run with a failed fan.
Replacing a System Fan
- While the power is running, examine the fans to determine which fan has failed.
- Simultaneously press down on the upper release tab and push up the lower release tab of the failed fan.

Figure 3-8. Fan Release Tabs
- Pull the fan out of the bay using the tabs.
Caution: Fans will continue to rotate for a brief time after removing them from the chassis. To avoid injury, keep fingers clear of the rotating fan blades.
- Place the new fan into the vacant fan bay. Confirm that the fan is fully seated in the fan bay and functioning properly.

natural_image
Technical line drawing of a server rack with internal components and ventilation slots (no text or symbols)Figure 3-9. Removing a Fan From the Housing, Right Side

natural_image
Technical line drawing of an internal server rack unit with mounting brackets and ventilation slots (no text or labels)Figure 3-10. Removing the Fan Housing, Left Side
Checking the Server Air Flow
- Make sure there are no objects to obstruct airflow in and out of the server.
- If you are using a front bezel, make sure the bezel filter is replaced periodically.
- Do not operate the server without drives or drive trays in the drive bays.
- Use only recommended server parts.
- Make sure no wires or foreign objects obstruct air flow through the chassis. Pull all excess cabling out of the airflow path or use shorter cables.
The control panel LEDs display system heat status. See “Control Panel” in Chapter 1 for details.
Overheating
There are several possible responses if the system overheats.
Overheat Temperature Setting
Some backplanes allow the overheat temperature to be set at 45, 50, or 55 by changing a jumper setting. For more information, consult the backplane user manual at www.supermicro.com. (Click Support, then the Manuals link.)
Responses
If the enclosure overheats:
- Use the LEDs to determine the nature of the overheating condition.
- Confirm that the chassis covers are installed properly.
- Make sure all fans are present and operating normally.
- Check the routing of the cables.
Power Supply
The chassis features redundant power supplies. The system will continue to operate if one module fails. It should be replaced as soon as convenient. The power supply modules are hot-swappable, meaning they can be changed without powering down the system. New units can be ordered directly from Supermicro or authorized distributors.
These power supplies are auto-switching capable. This feature enables them to automatically sense the input voltage and operate at a 100-120v or 180-240v.
Power Supply LEDs
On the rear of the power supply module, an LED displays the status.
- Solid Green: When illuminated, indicates that the power supply is on.
- Solid Amber: When illuminated, indicates the power supply is plugged in and turned off, or the system is off but in an abnormal state.
- Blinking Amber: When blinking, this system power supply temperature has reached 63C. The system will automatically power-down when the power supply temperature reaches 70C and restart when the power supply temperature goes below 60C.
Changing the Power Supply Module:
- Unplug the AC cord from the module to be replaced.
- On the back of the module, push the release tab sideways, as illustrated.
- Pull the module out using the handle.
- Push the new power supply module into the power bay until it clicks. Replace with the same model.
- Plug the AC power cord back into the module.

Figure 3-11. Removing the Power Supply
Removing the JBOD Control Board
The CB3 JBOD Control Board is mounted on a tray near the rear of the chassis. Note: This procedure should only be performed by a qualified technician, in consultation with the Supermicro Technical Support team.
- Power down the system as described in Section 3.1.
- Remove the power supply modules.
- Loosen the power supply holding bracket by removing the thumbscrew on the right side of the chassis, near the cover thumbscrew. Slide the bracket toward the left side of the chassis and lift up.

Figure 3-12. Power Supply Bracket Thumbscrew, Chassis Right Side

Figure 3-13. Power Supply Holding Bracket
-
Now the JBOD control board is visible. Disconnect all the cables connected on the control board, taking take note of the location for each connector, including the ATX power cable, FAN power cable, IPMI cable, I²C cable, and control panel cable.
-
Loosen the screws on the control board and lift out the control board

natural_image
Technical line drawing of an internal electronic device with circuit board and ventilation ducts (no text or symbols)Figure 3-13. Removing the JBOD Control Board
Notes
Appendix A
Power Supply Specifications
This appendix lists power supply specifications for your chassis system.
| 1000/1600W (Redundant) | |
| MFR Part # | PWS-1K66P-1R |
| AC Input | 1000W Output @ 100-140V, 12-8A, 50-60Hz1600W Output @ 180-240V, 8-6A, 50-60Hz |
| DC Output | 1000W: +12V/82A1600W: +12V/132A |
Appendix B
Standardized Warning Statements for AC Systems
About Standardized Warning Statements
The following statements are industry standard warnings, provided to warn the user of situations which have the potential for bodily injury. Should you have questions or experience difficulty, contact Supermicro's Technical Support department for assistance. Only certified technicians should attempt to install or configure components.
Read this appendix in its entirety before installing or configuring components in the Supermicro chassis.
These warnings may also be found on our website at http://www.supermicro.com/about/policies/safety_information.cfm.
Warning Definition

Warning! This warning symbol means danger. You are in a situation that could cause bodily injury. Before you work on any equipment, be aware of the hazards involved with electrical circuitry and be familiar with standard practices for preventing accidents.
警告の定義
この警告サインは危険を意味します。
Installation Instructions

Warning! Read the installation instructions before connecting the system to the power source.
設置手順書
Warning! This product relies on the building's installation for short-circuit (overcurrent) protection. Ensure that the protective device is rated not greater than: 250 V, 20 A.
サーキット・ブレーカー
Power Disconnection Warning

Warning! The system must be disconnected from all sources of power and the power cord removed from the power supply module(s) before accessing the chassis interior to install or remove system components.
電源切断の警告
Equipment Installation

Warning! Only trained and qualified personnel should be allowed to install, replace, or service this equipment.
機器の設置
Warning! This unit is intended for installation in restricted access areas. A restricted access area can be accessed only through the use of a special tool, lock and key, or other means of security. (This warning does not apply to workstations).
アクセス制限区域
Warning! There is the danger of explosion if the battery is replaced incorrectly. Replace the battery only with the same or equivalent type recommended by the manufacturer. Dispose of used batteries according to the manufacturer's instructions
電池の取り扱い
Redundant Power Supplies

Warning! This unit might have more than one power supply connection. All connections must be removed to de-energize the unit.
冗長電源装置
Warning! Hazardous voltage or energy is present on the backplane when the system is operating. Use caution when servicing.
バックプレーンの電圧
Comply with Local and National Electrical Codes

Warning! Installation of the equipment must comply with local and national electrical codes.
地方および国の電気規格に準拠
Warning! Ultimate disposal of this product should be handled according to all national laws and regulations.
製品の廃棄
Warning! Hazardous moving parts. Keep away from moving fan blades. The fans might still be turning when you remove the fan assembly from the chassis. Keep fingers, screwdrivers, and other objects away from the openings in the fan assembly's housing.
ファン・ホットスワップの警告
Power Cable and AC Adapter

Warning! When installing the product, use the provided or designated connection or procure cables, power cables and AC adaptors complying with local codes and safety requirements including proper cord size and plug. Using any other cables and adaptors could cause a malfunction or a fire. Electrical Appliance and Material Safety Law prohibits the use of UL or CSA-certified cables (that have UL/CSA shown on the code) for any other electrical devices than products designated by Supermicro only.
電源コードとACアダプター
This appendix provides details about the BPN-SAS3-946LEL1 backplane.
C.1 Safety Guidelines
ESD Safety Guidelines
Electrostatic Discharge (ESD) can damage electronic components. To prevent damage to your system, it is important to handle it very carefully. The following measures are generally sufficient to protect your equipment from ESD.
- Use a grounded wrist strap designed to prevent static discharge.
- Touch a grounded metal object before removing a component from the antistatic bag.
- Handle the backplane by its edges only; do not touch its components, peripheral chips, memory modules or gold contacts.
- When handling chips or modules, avoid touching their pins.
- Put the backplane and peripherals back into their antistatic bags when not in use.
General Safety Guidelines
- Always disconnect power cables before installing or removing any components from the computer, including the backplane.
- Disconnect the power cable before installing or removing any cables from the backplane.
- Make sure that the backplane is securely and properly installed on the motherboard to prevent damage to the system due to power shortage.
C.2 Version Information
The BPN-SAS3-946LEL1 backplane has been designed to utilize the most up-to-date technology available, providing your system with reliable, high-quality performance.
Always refer to the Supermicro website at www.supermicro.com for the latest updates, compatible parts and supported configurations.
C.3 Components and LEDs
Component Side Connectors

flowchart
graph TD
A["J1"] --> B["3"]
B --> C["4"]
C --> D["J30"]
D --> E["J15"]
E --> F["J16"]
F --> G["J45"]
G --> H["J31"]
H --> I["1"]
I --> J["2"]
J --> K["3"]
K --> L["7"]
L --> M["J15"]
Figure C-1. BPN-SAS3-946LEL1 Connector Side Components
- HDD Connectors: J31 - J45.
- HDD Connectors: J16 - J30.
- HDD Connectors: J1 - J15.
- 12V Power Cable Input: NI_TP1 and NI_TP2.
-
Ground Cable Input: NI_TP3 and NI_TP4.
-
SDB and UART Connector for the Secondary Expander: J53 and J54.
-
SDB and UART Connector for the Primary Expander: J50 and J51.
Connector Side Component Definitions
1. - 3. HDD Connectors
The HDD connectors are designated J1 through J45. These are for SAS3, SATA3, and SAS2 drives.
4. 12V Power Connector
The power connectors, designated NI_TP1 and NI_TP2, provide power to the backplane.
5. Ground Cable Input Connector
The ground cable input connectors are designated NI_TP3 and NI_TP4.
6. - 7. SDB and UART Connectors
The Serial Debug (SDB) and UART connectors for the primary and secondary expanders are designated J50, J51, J53, and J54. The debug connectors are for the manufacturer's diagnostic purposes only.
Connector Side LED Indicators and SAS Connectors

flowchart
graph TD
A["LEDF31"] --> B["J31"]
C["LEDA31"] --> D["J45"]
E["LEDF16"] --> F["J16"]
G["LEDA16"] --> H["J16"]
I["LEDF30"] --> J["J30"]
K["LEDA30"] --> L["J30"]
M["J15"] --> N["J1"]
O["LEDF15"] --> P["J45"]
Q["LEDA15"] --> R["J45"]
Figure C-2. BPN-SAS3-946LEL1 Connector Side LEDs
| Connector Side SAS Connectors | |||||
| SAS Connector | SAS Drive Number | SAS Connector | SAS Drive Number | SAS Connector | SAS Drive Number |
| J1 | SAS HDD #0 | J16 | SAS HDD #15 | J31 | SAS HDD #30 |
| J2 | SAS HDD #1 | J17 | SAS HDD #16 | J32 | SAS HDD #31 |
| J3 | SAS HDD #2 | J18 | SAS HDD #17 | J33 | SAS HDD #32 |
| J4 | SAS HDD #3 | J19 | SAS HDD #18 | J34 | SAS HDD #33 |
| J5 | SAS HDD #4 | J20 | SAS HDD #19 | J35 | SAS HDD #34 |
| J6 | SAS HDD #5 | J21 | SAS HDD #20 | J36 | SAS HDD #35 |
| J7 | SAS HDD #6 | J22 | SAS HDD #21 | J37 | SAS HDD #36 |
| J8 | SAS HDD #7 | J23 | SAS HDD #22 | J38 | SAS HDD #37 |
| J9 | SAS HDD #8 | J24 | SAS HDD #23 | J39 | SAS HDD #38 |
| J10 | SAS HDD #9 | J25 | SAS HDD #24 | J40 | SAS HDD #39 |
| J11 | SAS HDD #10 | J26 | SAS HDD #25 | J41 | SAS HDD #40 |
| J12 | SAS HDD #11 | J27 | SAS HDD #26 | J42 | SAS HDD #41 |
| J13 | SAS HDD #12 | J28 | SAS HDD #27 | J43 | SAS HDD #42 |
| J14 | SAS HDD #13 | J29 | SAS HDD #28 | J44 | SAS HDD #43 |
| J15 | SAS HDD #14 | J30 | SAS HDD #29 | J45 | SAS HDD #44 |
| Connector Side LED Indicators | |||||
| SAS Connector | Hard Drive Activity LED | Failure LED | SAS Connector | Hard Drive Activity LED | Failure LED |
| J1 LEDA1 LEDF1 J24 | LEDA24 LEDF24 | ||||
| J2 LEDA2 LEDF2 J25 | LEDA25 LEDF25 | ||||
| J3 LEDA3 LEDF3 J26 | LEDA26 LEDF26 | ||||
| J4 LEDA4 LEDF4 J27 | LEDA27 LEDF27 | ||||
| J5 LEDA5 LEDF5 J28 | LEDA28 LEDF28 | ||||
| J6 LEDA6 LEDF6 J29 | LEDA29 LEDF29 | ||||
| J7 LEDA7 LEDF7 J30 | LEDA30 LEDF30 | ||||
| J8 LEDA8 LEDF8 J31 | LEDA31 LEDF31 | ||||
| J9 LEDA9 LEDF9 J32 | LEDA32 LEDF32 | ||||
| J10 LEDA10 LEDF10 J33 | LEDA33 LEDF33 | ||||
| J11 LEDA11 LEDF11 J34 | LEDA34 LEDF34 | ||||
| J12 LEDA12 LEDF12 J35 | LEDA35 LEDF35 | ||||
| J13 LEDA13 LEDF13 J36 | LEDA36 LEDF36 | ||||
| J14 LEDA14 LEDF14 J37 | LEDA37 LEDF37 | ||||
| J15 LEDA15 LEDF15 J38 | LEDA38 LEDF38 | ||||
| J16 LEDA16 LEDF16 J39 | LEDA39 LEDF39 | ||||
| J17 LEDA17 LEDF17 J40 | LEDA40 LEDF40 | ||||
| J18 LEDA18 LEDF18 J41 | LEDA41 LEDF41 | ||||
| J19 LEDA19 LEDF19 J42 | LEDA42 LEDF42 | ||||
| J20 LEDA20 LEDF20 J43 | LEDA43 LEDF43 | ||||
| J21 LEDA21 LEDF21 J44 | LEDA44 LEDF44 | ||||
| J22 LEDA22 LEDF22 J45 | LEDA45 LEDF45 | ||||
| J23 LEDA23 LEDF23 | |||||
Expander Chip Side Components

Figure C-3. BPN-SAS3-946LEL1 Expander Chip Side Components
- Primary Expander Chip.
- Secondary Expander Chip.
-
Primary SAS Slim Line Connectors: CN1 and CN2.
-
Secondary SAS Slim Line Connectors: CN3 and CN4.
- Primary UART Connector: J52.
- I ^2 C Connector: J48.
Expander Chip Side Component Definitions
1. - 2. Primary and Secondary Expander Chips
These chips allow connectivity to the primary and secondary components on the backplane.
3. Primary SAS Slim Line Connectors
These primary SAS slim line connectors are designated CN1 and CN2.
4. Secondary SAS Slim Line Connectors
These secondary SAS slim line connectors are designated CN3 and CN4.
5. Primary UART Connector
The primary UART connector is designated J52 and is used for the manufacturer's diagnostic purposes only.
6. I²C Connector
The I²C connector is designated J48. This connector is used to monitor hard drive activity and status through LEDs. See the table on the right for pin definitions. J48 is for the manufacturer's use only.
| I2C ConnectorPin Definitions | |
| Pin# Definition | |
| 1 Data | |
| 2 Ground | |
| 3 Clock | |
| 4 No Connection | |
C.4 Cascading Configurations
Cascading Backplanes with SAS RAID and HBA Controllers
The BPN-SAS3-946LEL1 can be cascaded to a second BPN-SAS3-946LEL1 backplane and an AOM-S3108M-H8L-P SAS RAID, AOC-S3108L-H8IR SAS RAID, AOC-S3008L-L8E HBA, or AOM-S3008-L8-SB HBA controller using the primary and secondary expander components of the backplane. Note that the connectors are located on the undersides of the boards in the following illustrations.
Cascading Configuration, Backplanes to Internal Controller Connecting Backplane in a Server to Internal Controller and to Backplane in a JBOD
- Power down the system and remove the power cords from the rear of the power supplies. Open the chassis cover and access the backplanes as described in your system manual.

Figure C-4. Backplane Cascading Configuration
- Locate connectors CN1 and CN2 on the underside of the 1st backplane.
-
Plug the cables into the 1st backplane connectors CN1 and CN2, then route them to connectors CN1 and CN2 on the underside of the AOM-S3108M-H8L-P SAS controller or AOM-S3008-L8-SB HBA in the same server as the 1st backplane, as illustrated in Figure C-4.
-
To connect the 1st backplane connectors CN3 and CN4 to the 2nd backplane connectors CN1 and CN2, plug the External MiniSAS HD to External MiniSAS HD 1m cables (CBL-SAST-0573) into the server out port and into the JBOD in upstream port of the JBOD where the 2nd backplane is located, as illustrated in Figure C-4.
- A 3rd backplane can be added using a connection from CN3 and CN4 of the 2nd backplane through its JBOD out downstream port.
- Close the chassis cover, plug the power cords into the rear of the power supplies, and power up the system.
Cascading Configuration, Backplanes to External Controller Connecting Backplanes in JBODs to External Controller
- Power down the system and remove the power cords from the rear of the power supplies. Open the chassis cover and access the backplanes as described in your system manual.

Figure C-5. Backplane Cascading Configuration
-
To connect the 1st backplane connectors CN1 and CN2 to the controller located in a server, plug the External MiniSAS HD to External MiniSAS HD 1m cables (CBL-SAST-0573) into the JBOD in upstream port of the JBOD where the 1st backplane is located and into connectors CN1 and CN2 on the underside of the AOM-S3108M-H8L-P SAS controller or AOM-S3008-L8-SB HBA, as illustrated in Figure C-5.
-
To connect 1st backplane connectors CN3 and CN4 to 2nd backplane connectors CN1 and CN2, plug the External MiniSAS HD to External MiniSAS HD cables (CBL-SAST-0573) into the JBOD out downstream port of the JBOD where the 1st backplane is located and into the JBOD in upstream port of the JBOD where the 2nd backplane is located, as illustrated in Figure C-5.
- A 3rd backplane can be added using a connection from CN3 and CN4 of the 2nd backplane through its JBOD out downstream port.
- Close the chassis cover, plug the power cords into the rear of the power supplies, and power up the system.
Cascading Configuration, Backplane to Internal HBA Controllers
A server configures two internal HBA cards for MPIO maximum performance.
Connecting Backplane in a Server to Internal HBAs
- Power down the system and remove the power cords from the rear of the power supplies. Open the chassis cover and access the backplane as described in your system manual.
- Locate connectors CN1 and CN2 on the underside of the backplane in a server.
- Plug the cables into connectors CN1 and CN2, then route them to connectors CN1 and CN2 on the underside of the AOM-S3008-L8-SB HBA located within the same server as the backplane, as illustrated in Figure C-6.
- Locate connectors CN3 and CN4 on the underside of the backplane.
- Connect the cables to CN3 and CN4, then route them to CN1 and CN2 on the underside of the AOC-S3008L-L8E HBA in the same server, as illustrated in Figure C-6.
- Close the chassis cover, plug the power cords into the rear of the power supplies, and power up the system.
Server System

Figure C-6. Backplane Cascading Configuration
Cascading Configuration, Backplane to Internal SAS Controllers
A server configures two internal RAID controller cards with zoning utility enabled (Flexible Zoning). The 1st RAID controller card can be assigned to the first X number of drives. The 2nd RAID controller card can be assigned to the rest of the drives (45 - X).
Connecting Backplane in a Server to Internal RAID Controller Cards
-
Power down the system and remove the power cords from the rear of the power supplies. Open the chassis cover and access the backplane as described in your system manual.
-
Locate connectors CN1 and CN2 on the underside of the backplane in a server.
-
Plug the cables into connectors CN1 and CN2, then route them to connectors CN1 and CN2 on the underside of the AOM-S3108M-H8L-P RAID controller card located within the same server as the backplane, as illustrated in Figure C-7.
Server System

Figure C-7. Backplane Cascading Configuration
- Locate connectors CN3 and CN4 on the underside of the backplane.
- Connect the cables to CN3 and CN4, then route them to CN1 and CN2 on the underside of the AOC-S3108L-H8IR RAID controller card in the same server, as illustrated in Figure C-7.
- Close the chassis cover, plug the power cords into the rear of the power supplies, and power up the system.
Appendix D
CSE-PTJBOD-CB3 Control Board
D.1 Overview
The CSE-PTJBOD-CB3 model JBOD control board allows the user to remotely control and monitor the chassis resources using IPMI, such as powering on or off, controlling fan speeds and reading temperature data from the backplane. It has been designed to utilize the most up-to-date technology available, providing your system with reliable, high-quality performance.
This manual reflects the revision 1.02 JBOD control board, the most current release available at the time of publication. Refer to the Supermicro web site at www.supermicro.com for the latest updates, compatible parts and supported configurations.
D.2 Safety Guidelines
ESD Safety Guidelines
Electrostatic Discharge (ESD) can damage electronic components. To prevent damage to your system, it is important to handle it very carefully. The following measures are generally sufficient to protect your equipment from ESD.
- Use a grounded wrist strap designed to prevent static discharge.
- Touch a grounded metal object before removing a component from the antistatic bag.
- Handle the control board by its edges only; do not touch its components, peripheral chips, memory modules or gold contacts.
- When handling chips or modules, avoid touching their pins.
- Put the control board and peripherals back into their antistatic bags when not in use.
General Safety Guidelines
- Always disconnect power cables before installing or removing any components from the computer, including the control board.
- Disconnect the power cable before installing or removing any cables from the control board.
- Make sure that the control board is securely and properly installed in the chassis to prevent damage to the system due to power shortage.
D.3 Components, Connectors, Jumpers and LEDs
Component and Connector Locations

Figure CB3-1. Components and Connectors on the CSE-PTJBOD-CB3
Components and Connectors
- BMC Chip
- SAS2/SAS3 I ^2 C Connectors JP1-JP4
- Manufacturing Test Connector: J3
- Manufacturer's USB Test Connector: FB1
- IPMI LAN LED Header: JP6
-
IPMI LAN Connector: J8
-
(SC847D only) SAS2
I^2C Connectors: J4 - J7 - Control Panel Connector: JF1
- PMBus Connector: JPI ^2 C1
- Fan Connectors: FAN1 - FAN10
- ATX Power Connector: JPW1
Component and Connector Definitions
1. BMC Chip
The Baseboard Management Controller (BMC) chip monitors the physical state of a system and provides communication with the system administrator through an independent connection.
2. I²C Connectors
These connectors (JP1-JP4) accept cables for up to four SAS2/SAS3 backplanes that carry management data between the the backplane and the control board.
3 and 4. Manufacturing Test Connectors
Connectors J3 and FB1 are for Supermicro manufacturing use only.
5. IPMI LAN LED Header
This connector is designated JP6 and is used to connect to the LED indicators on the chassis using cable CBL-NTWK-0584 or CBL-NTWK-0587.

6. IPMI LAN Connector
The Intelligent Platform Management Interface (IPMI) LAN connector is designated J8 and supports connectivity with a local network using cable CBL-NTWK-0584 or CBL-NTWK-0587.
7. SC847D SAS2 I²C Connectors
(Used for SC847D only) The backplane connectors, designated J4-J7, accept internal cables to connect to up to four SC847D expanders.
8. Control Panel Connector
This connector is designated JF1 and connects to the control panel on the chassis. See Chapter 3 for additional control panel information.

9. PMBus Connector
This connector is designated JPI2C1 and connects the power distributor to the Power Management Bus (PMBus).
10. Fan Connectors
The fan connectors supply power to the fans and are designated FAN1-FAN10.
11. ATX Power Connector
The ATX power connector is designated JPW1.
Jumpers and LED Indicators

Figure CB3-2. Jumpers
| SAS2/SAS3 Jumpers | |
| Jumper Description | |
| JP7 | Pins 1-2: IPMI factory mode, IP 192.168.1.99Pins 2-3: User mode (static/DHCP) |
| JP5 | Pins 1-2: SAS3 enabledPins 2-3: SAS2 enabled and SC847D |
To enable SAS2 or SAS3 functionality on the connectors, set the JP5 jumper as noted.

Figure CB3-3. LED Indicators
| LED Indicators | |
| LED Description | |
| LE1 Heartbeat LED: A blinking LED indicates BMC activity | |
| LE2 Power LED: DC power indicator |
D.4 I²C Cabling to the Backplane
This JBOD storage enclosure is preconfigured with the internal cables connected. Use this section for reference if a cable becomes disconnected during maintenance. Ensure that the JP5 jumper on the JBOD control board is set according to the table in the section, Jumpers and LED Indicators.
When enabling SAS2/SAS3 functionality, connect the ^2 C connectors on the JBOD control board (Figure CB3-1) to the proper connector on the backplane. Refer to the table below and the backplane documentation to determine the correct connector.

Figure CB3-4. SAS I²C Cabling (except SC847D)
Connections for SC946L JBOD Chassis
Specific I ^2 C connectors (JP1-JP4) on the JBOD control board are connected to the backplane.
| I2C Cable Connections for SC946L JBOD | |
| Control Board | BPN-SAS3-216EL Backplane |
| JP1 | SMB connector |
| JP2 | na |
| JP3 | na |
| JP4 | Optional for front LCD panel |
D.5 JBOD Power Up/Power Down Sequences
There are several procedures to turn on or off the system with the CB3 JBOD control board.
Power Up
First Use or Power Cord Plug-In
- Plug the power cords into the rear of the power supplies.
- Wait until blue Information LED starts to blink.
- Press the power button once. The JBOD control board initiates the power up sequence in three seconds.
After Normal Shutdown by IPMI or Power Button
Press the power button once. The JBOD control board will initiate the power up sequence in three seconds.
After a Power Loss
The system will power up automatically approximately fifteen seconds after the power returns.
Power Down
- Hold down the power button. The blue Information LED will begin blinking. Continue to hold the power button.
- Release power button after blue LED stops blinking and goes dark.
- The shutdown sequence will begin and shut down the system within ten seconds
D.6 IPMI Static IP to DHCP Setting
IP Address to DHCP Setting
- Download the utility from the Supermicro website or technical support.
- Extract the file to a known folder.
- By default, the JBOD control board will be configured in static IP 192.168.1.99.
- Change the host to static IP as 192.168.1.10.
- Go to the IPMI website and select the Configuration tab and then select the Network page.
- Change the setting from Static to DHCP mode
If default website is not responding, press the reset button for more than ten seconds to reset to default. You will observe that the fan speed will slow and then return to normal. Continue to change to DHCP mode when the fan reaches normal speed.
- Save the new setting.
- Change the host IP back to DHCP mode.
- Determine the DHCP IP address of the host, for example 10.1.1.50.
- Run the command prompt with administrative privileges.
- Go to the utility folder and type:
findit 00-25-90-xx-xx-xx yy.zz.255.255
Where: xx-xx-xx is, enter the JBOD control board MAC ID. yy.zz represents the first two octets of your host IP. Example: findit 00-25-90-xx-xx-xx 10.1.255.255
- The utility will return the IP address of the JBOD control board. Enter the IP in browser and access the IPMI web GUI.
